Launch GateLabR

Opens the canonical GateLab React interface with a thin SingleCellExperiment host. Works both from an installed package (library(GateLabR); launchGatingApp()) and from a source clone (source("launch.R"); launchGatingApp()).

Usage

launchGatingApp(
  sce = NULL,
  sample_column = NULL,
  port = NULL,
  launch.browser = TRUE
)

Arguments

sce

Optional SingleCellExperiment. If NULL, the first SCE in the global environment is used.

sample_column

Optional colData column defining samples. When omitted, common sample columns such as sample_id are detected.

port

Port for Shiny (default: auto-select).

launch.browser

Whether to open a browser window (default: TRUE).

Value

Invisibly NULL; runs the Shiny app (blocking).