Skip to contents

Starts the shared GateLab TypeScript/React application with a thin Shiny adapter for a SingleCellExperiment. This is the default interface used by launchGatingApp. The previous GateLabR-specific Shiny interface remains available through launchLegacyGateLabR for one transition release.

Usage

launchReactGateLab(
  sce = NULL,
  sample_column = NULL,
  port = NULL,
  launch.browser = TRUE
)

Arguments

sce

A SingleCellExperiment. If NULL, the first SCE in the global environment is used.

sample_column

Optional colData column defining samples. When omitted, common sample columns such as sample_id are detected.

port

Port for Shiny (default: auto-select).

launch.browser

Whether to open a browser window (default: TRUE).

Value

Invisibly NULL; runs the Shiny app (blocking).